|
|
|
|
|
| Pardo, Sophie; Hess, Philipp; Simon, Elodie; Barille, Laurent; Geslin, Emmanuelle; Cognie, Bruno; Martin-jezequel, Véronique; Sechet, Véronique; Herrenknecht, Christine; Baron, Regis; Bourseau, Patrick; Amzil, Zouher; Masse, Anthony; Vandanjon, Laurent; Dumay, Justine; Lebeau, Thierry; Turpin, Vincent; Mondeguer, Florence; Petitgas, Pierre; Trouillet, Brice; Mercier, Denis; Guillotreau, Patrice; Guineberteau, Thierry; Mahevas, Stephanie; Schoefs, Franck; Sophie Pardo; Philipp Hess; Pauline Borgniet; Laurent Barillé; Emmanuelle Geslin; Bruno Cognie; Véronique Martin-Jezequel; Véronique Sechet; Christine Herrenknecht; Régis Baron; Patrick Bourseau; Zouher Amzil; Anthony Massé; Laurent Vandanjon; Justine Dumay; Thierry Lebeau; Vincent Turpin; Florence Mondeguer; Pierre Petitgas; Brice Trouillet. |
| COSELMAR, a 4-year project financed by the Région des Pays de la Loire at 2.1 M€, officially started on the 7th January 2013. The project is coordinated by Philipp Hess (IFREMER) and Sophie Pardo (Université de Nantes-LEMNA) and falls under the Federation for Research Institut Universitaire Mer et Littoral (IUML, FR CNRS 3473)*. COSELMAR has also been approved by the Scientific Council of the MSH Ange Guépin. COSELMAR is a research project uniting 5 research units of IFREMER and 11 laboratories of the Université de Nantes, along with academic partners, and national and international industries. The aim is to achieve a better understanding of the marine and coastal ecosystems and the associated resources. The project will also provide insights into risk... |
| Tipo: Text |
|
| Ano: 2017 |
URL: https://archimer.ifremer.fr/doc/00406/51793/52550.pdf |
| |
|
|
| Choquel, Constance; Geslin, Emmanuelle; Metzger, Edouard; Filipsson, Helena L.; Risgaard-petersen, Nils; Launeau, Patrick; Giraud, Manuel; Jauffrais, Thierry; Jesus, Bruno; Mouret, Aurélia. |
| Oxygen availability impacts the marine nitrogen cycle at a range of spatial and temporal scales. Invasive organisms have shown to sustainably affect sediment geochemistry and benthic ecology. Nonionella sp. T1 was recently described as an invasive benthic foraminifer in the North Sea region. Here, we demonstrate the impact of this denitrifying species on the foraminifera fauna and the nitrogen cycle of the Gullmar Fjord (Sweden). The foraminifera contribution to benthic denitrification was estimated by coupling living foraminifera micro-distribution, denitrification rate measurement and sedimentary nitrate 2D distribution. Nonionella sp. T1 dominated the foraminifera fauna and could denitrify up to 50–100 % of nitrate porewater in oxygenated bottom waters... |
| Tipo: Text |
|
| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00643/75482/76327.pdf |
| |
|
|
| Jauffrais, Thierry; Jesus, Bruno; Metzger, Edouard; Mouget, Jean-luc; Jorissen, Frans; Geslin, Emmanuelle. |
| Some benthic foraminifera have the ability to incorporate functional chloroplasts from diatoms (kleptoplasty). Our objective was to investigate chloroplast functionality of two benthic foraminifera (Haynesina germanica and Ammonia tepida) exposed to different irradiance levels (0, 25, 70 mot photon m(-2) s(-1)) using spectral reflectance, epifluorescence observations, oxygen evolution and pulse amplitude modulated (PAM) fluorometry (maximum photosystem II quantum efficiency (Fv/Fm) and rapid light curves (RLC)). Our results clearly showed that H. germanica was capable of using its kleptoplasts for more than 1 week while A. tepida showed very limited kleptoplastic ability with maximum photosystem II quantum efficiency (Fv/Fm = 0.4), much lower than H.... |
| Tipo: Text |
|
| Ano: 2016 |
URL: https://archimer.ifremer.fr/doc/00457/56899/58754.pdf |
| |
|
|
| Bird, Clare; Lekieffre, Charlotte; Jauffrais, Thierry; Meibom, Anders; Geslin, Emmanuelle; Filipsson, Helena L.; Maire, Olivier; Russell, Ann D.; Fehrenbacher, Jennifer S.. |
| Nitrogen availability often limits biological productivity in marine systems, where inorganic nitrogen, such as ammonium is assimilated into the food web by bacteria and photoautotrophic eukaryotes. Recently, ammonium assimilation was observed in kleptoplast-containing protists of the phylum foraminifera, possibly via the glutamine synthetase/glutamate synthase (GS/GOGAT) assimilation pathway imported with the kleptoplasts. However, it is not known if the ubiquitous and diverse heterotrophic protists have an innate ability for ammonium assimilation. Using stable isotope incubations (15N-ammonium and 13C-bicarbonate) and combining transmission electron microscopy (TEM) with quantitative nanoscale secondary ion mass spectrometry (NanoSIMS) imaging, we... |
| Tipo: Text |
Palavras-chave: Nitrogen cycle; Heterotrophic protists; Foraminifera; Ammonium assimilation; Heterotrophy; Marine. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00662/77421/79087.pdf |
| |
|
|
| Jauffrais, Thierry; Lekieffre, Charlotte; Schweizer, Magali; Geslin, Emmanuelle; Metzger, Edouard; Bernhard, Joan M.; Jesus, Bruno; Filipsson, Helena L.; Maire, Olivier; Meibom, Anders. |
| The assimilation of inorganic compounds in foraminiferal metabolism compared to predation or organic matter assimilation is unknown. Here we investigate possible inorganic‐compound assimilation in Nonionellina labradorica, a common kleptoplastidic benthic foraminifer from Arctic and North Atlantic sublittoral regions. The objectives were to identify the source of the foraminiferal kleptoplasts, assess their photosynthetic functionality in light and darkness, and investigate inorganic nitrogen and sulfate assimilation. We used DNA barcoding of a ~830 bp fragment from the SSU rDNA to identify the kleptoplasts, and correlated transmission electron microscopy and nanometer‐scale secondary ion mass spectrometry (TEM‐NanoSIMS) isotopic imaging to study... |
| Tipo: Text |
|
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00460/57188/59151.pdf |
| |
|
|
| Debenay, Jean-pierre; Geslin, Emmanuelle; Guillou, Jean-jacques; De Casamajor, Marie-noelle. |
| This work is based on about 2,000 samples. It provides a synthetic description of the distribution patterns of fûraminiferal assemblages in paralie environments and shows on two examples the effect of anthropogenic impacts. It shows that despite the great diversity of eeological parameters, foraminiferal assemblages are naturally distributeà along a fev/ major gradients. Anomalies in these distribution patterns or morphological abnormalities of the tests indicate anthropogenic or natural stresses. An increase in the number of individuals, specifie richness and test size indicate organic pollution while chemicai pollution as an inverse effect. ln Port-Joinville harbour, Cribroelphidium excavatum and Haynesina gennanica characterize the areas submited to the... |
| Tipo: Text |
|
| Ano: 2000 |
URL: https://archimer.ifremer.fr/doc/00478/58965/61566.pdf |
| |
|
|
| Jauffrais, Thierry; Lekieffre, Charlotte; Schweizer, Magali; Jesus, Bruno; Metzger, Edouard; Geslin, Emmanuelle. |
| The aim of this work is to document the complex nutritional strategy developed by kleptoplastic intertidal foraminifera. We study the mixotrophic ability of a common intertidal foraminifer, E. williamsoni, by (1) investigating the phylogenetic identity of the foraminiferal kleptoplasts, (2) following their oxygenic photosynthetic capacity, and (3) observing the modification in cellular ultrastructural features in response to photoautotrophic conditions. This was achieved by coupling molecular phylogenetic analyses and TEM observations with non-destructive measurements of kleptoplast O2 production over a 15-day experimental study. Results show that the studied E. williamsoni actively selected kleptoplasts mainly from pennate diatoms and had the ability to... |
| Tipo: Text |
Palavras-chave: Foraminifera; Electron microscopy; DNA barcoding; Kleptoplasty; Lipids. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00487/59894/63074.pdf |
| |
|
|
|
